Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-1A0N8R0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-1A0N8R0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Gm4535-201ENSMUST00000182274 558 ntBASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Gm10355-201ENSMUST00000097146 517 ntBASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-1A0N8R0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms