Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm8097-201ENSMUST00000117903 829 ntBASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Carlr-201ENSMUST00000181515 2574 ntBASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm15358-201ENSMUST00000119249 520 ntBASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms