Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm7862-201ENSMUST00000121461 292 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mir8098-201ENSMUST00000184011 137 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm5864-201ENSMUST00000202263 970 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm45167-201ENSMUST00000208007 322 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav21-dv12A0A075B6C4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav21-dv12A0A075B6C4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms