Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.74□□□□□ -0.53
Trav17A0A075B655 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.74□□□□□ -0.53
Trav17A0A075B655 AA414768-201ENSMUST00000121924 1257 ntBASIC11.74□□□□□ -0.53
Trav17A0A075B655 Gm23634-201ENSMUST00000175071 91 ntBASIC11.74□□□□□ -0.53
Trav17A0A075B655 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.74□□□□□ -0.53
Trav17A0A075B655 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav17A0A075B655 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Gm8097-201ENSMUST00000117903 829 ntBASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.73□□□□□ -0.53
Trav17A0A075B655 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.73□□□□□ -0.53
Trav17A0A075B655 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav17A0A075B655 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.72□□□□□ -0.53
Trav17A0A075B655 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms