Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm13168-201ENSMUST00000121771 632 ntBASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Mir5130-201ENSMUST00000175160 84 ntBASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm20760-201ENSMUST00000179197 648 ntBASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav16d-dv11A0A075B617 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm5417-201ENSMUST00000079706 384 ntBASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav16d-dv11A0A075B617 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms