Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm9726-201ENSMUST00000180321 678 ntBASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm2451-201ENSMUST00000199447 999 ntBASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm10290-201ENSMUST00000200451 999 ntBASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-1A0A075B5Z7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-1A0A075B5Z7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm25948-201ENSMUST00000175334 112 ntBASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms