Protein–RNA interactions for Protein: A0A075B5Y3

Ighv1-80, Immunoglobulin heavy variable 1-80 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-80A0A075B5Y3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ighv1-80A0A075B5Y3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ighv1-80A0A075B5Y3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-80A0A075B5Y3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.26□□□□□ -0.61
Ighv1-80A0A075B5Y3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-80A0A075B5Y3 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms