Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lgr5Q9Z1P4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lgr5Q9Z1P4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Gm18018-201ENSMUST00000198273 408 ntBASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lgr5Q9Z1P4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm12091-201ENSMUST00000146791 830 ntBASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm28631-201ENSMUST00000190740 334 ntBASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm8515-201ENSMUST00000194852 576 ntBASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm18187-201ENSMUST00000196476 984 ntBASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lgr5Q9Z1P4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Gm10275-202ENSMUST00000168697 495 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms