Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Gm18622-201ENSMUST00000219361 595 ntBASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ap4s1Q9WVL1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap4s1Q9WVL1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap4s1Q9WVL1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Matn2-206ENSMUST00000228570 2798 ntBASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap4s1Q9WVL1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms