Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Gm44771-201ENSMUST00000206975 626 ntBASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Gm5364-201ENSMUST00000216789 889 ntBASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClcnkaQ9WUB7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Gm43767-201ENSMUST00000198933 381 ntBASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms