Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Syt7-204ENSMUST00000223586 1344 ntBASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Gm14719-201ENSMUST00000121891 340 ntBASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Mir6420-201ENSMUST00000185032 102 ntBASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col13a1Q9R1N9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.58□□□□□ -0.39
Col13a1Q9R1N9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col13a1Q9R1N9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col13a1Q9R1N9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col13a1Q9R1N9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col13a1Q9R1N9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Gm9824-201ENSMUST00000178707 561 ntBASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col13a1Q9R1N9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.57□□□□□ -0.4
Col13a1Q9R1N9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms