Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Gm10275-201ENSMUST00000092620 635 ntBASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubd1Q9R1K7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Sybu-209ENSMUST00000228639 4113 ntBASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubd1Q9R1K7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubd1Q9R1K7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.96□□□□□ -0.02
Tubd1Q9R1K7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Gm25287-201ENSMUST00000103846 110 ntBASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Gm22918-201ENSMUST00000103855 110 ntBASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Mir6990-201ENSMUST00000183724 91 ntBASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubd1Q9R1K7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms