Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Gm24541-201ENSMUST00000103871 96 ntBASIC13.06□□□□□ -0.32
Nubp1Q9R060 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Gm38225-201ENSMUST00000194001 393 ntBASIC13.06□□□□□ -0.32
Nubp1Q9R060 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Gm7653-201ENSMUST00000214567 508 ntBASIC13.06□□□□□ -0.32
Nubp1Q9R060 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC13.06□□□□□ -0.32
Nubp1Q9R060 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.06□□□□□ -0.32
Nubp1Q9R060 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp1Q9R060 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Gm6973-201ENSMUST00000117080 721 ntBASIC13.05□□□□□ -0.32
Nubp1Q9R060 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.05□□□□□ -0.32
Nubp1Q9R060 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Gm14767-201ENSMUST00000121559 586 ntBASIC13.05□□□□□ -0.32
Nubp1Q9R060 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Gm37604-201ENSMUST00000191749 1272 ntBASIC13.05□□□□□ -0.32
Nubp1Q9R060 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp1Q9R060 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm8410-201ENSMUST00000117225 605 ntBASIC13.04□□□□□ -0.32
Nubp1Q9R060 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms