Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.9□□□□□ -0.5
Smco4Q9JIS3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Gm37292-201ENSMUST00000192062 758 ntBASIC11.89□□□□□ -0.51
Smco4Q9JIS3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco4Q9JIS3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smco4Q9JIS3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms