Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Nkx2-4Q9EQM3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-4Q9EQM3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-4Q9EQM3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.08■□□□□ 0.01
Nkx2-4Q9EQM3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-4Q9EQM3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Gm13392-201ENSMUST00000117708 150 ntBASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Gm6916-202ENSMUST00000205523 195 ntBASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nkx2-4Q9EQM3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Gm12585-201ENSMUST00000117307 290 ntBASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Gm13464-201ENSMUST00000119418 935 ntBASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-4Q9EQM3 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms