Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a3bpQ9EQG9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Col4a3bpQ9EQG9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a3bpQ9EQG9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a3bpQ9EQG9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a3bpQ9EQG9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a3bpQ9EQG9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Gm11594-201ENSMUST00000122313 162 ntBASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a3bpQ9EQG9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a3bpQ9EQG9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a3bpQ9EQG9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Gm18246-201ENSMUST00000221023 728 ntBASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms