Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Gm11025-201ENSMUST00000140773 466 ntBASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdc40Q9DC48 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Gm5177-201ENSMUST00000183092 997 ntBASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Gm27301-201ENSMUST00000184012 127 ntBASIC13.72□□□□□ -0.21
Cdc40Q9DC48 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.72□□□□□ -0.21
Cdc40Q9DC48 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Celf4-206ENSMUST00000224553 1729 ntBASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdc40Q9DC48 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Mir1895-201ENSMUST00000122615 79 ntBASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Gm27494-201ENSMUST00000184735 189 ntBASIC13.71□□□□□ -0.21
Cdc40Q9DC48 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms