Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Gm11543-201ENSMUST00000120758 370 ntBASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssmem1Q9D9Y8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ssmem1Q9D9Y8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssmem1Q9D9Y8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssmem1Q9D9Y8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssmem1Q9D9Y8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Gm6973-201ENSMUST00000117080 721 ntBASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssmem1Q9D9Y8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm13365-201ENSMUST00000121188 973 ntBASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm18889-201ENSMUST00000174284 929 ntBASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms