Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chmp5Q9D7S9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp5Q9D7S9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp5Q9D7S9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp5Q9D7S9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp5Q9D7S9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Gm4535-201ENSMUST00000182274 558 ntBASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Gm10355-201ENSMUST00000097146 517 ntBASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Chmp5Q9D7S9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms