Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.29■□□□□ 0.36
Ccdc7Q9D541 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Gm15590-201ENSMUST00000078419 552 ntBASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.28■□□□□ 0.36
Ccdc7Q9D541 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc7Q9D541 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc7Q9D541 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc7Q9D541 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm12350-201ENSMUST00000121208 462 ntBASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm16026-204ENSMUST00000162652 683 ntBASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Mir5131-201ENSMUST00000175426 93 ntBASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.26■□□□□ 0.35
Ccdc7Q9D541 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms