Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
5530400C23RikQ9D3I0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gm2272-201ENSMUST00000194903 582 ntBASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
5530400C23RikQ9D3I0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Gm27525-201ENSMUST00000184465 107 ntBASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Gm17968-201ENSMUST00000194902 784 ntBASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
5530400C23RikQ9D3I0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
5530400C23RikQ9D3I0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms