Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Gm18622-201ENSMUST00000219361 595 ntBASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Celf4-206ENSMUST00000224553 1729 ntBASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim13Q9CYB0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Gm33142-201ENSMUST00000193913 867 ntBASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim13Q9CYB0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms