Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gm7222-201ENSMUST00000117512 906 ntBASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gm27646-201ENSMUST00000183989 110 ntBASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gm2651-201ENSMUST00000203560 838 ntBASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpusd4Q9CWX4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Gm11764-201ENSMUST00000120221 623 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Gm6550-201ENSMUST00000187574 993 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 AV026068-213ENSMUST00000223675 1171 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rpusd4Q9CWX4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Gm12350-201ENSMUST00000121208 462 ntBASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Mir5126-201ENSMUST00000175513 77 ntBASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpusd4Q9CWX4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpusd4Q9CWX4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms