Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc3Q9CW03 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.4■□□□□ 0.38
Smc3Q9CW03 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc3Q9CW03 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc3Q9CW03 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc3Q9CW03 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Smc3Q9CW03 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc3Q9CW03 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Smc3Q9CW03 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc3Q9CW03 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Gm9103-201ENSMUST00000119371 405 ntBASIC17.39■□□□□ 0.37
Smc3Q9CW03 Gm15173-201ENSMUST00000122049 433 ntBASIC17.39■□□□□ 0.37
Smc3Q9CW03 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.39■□□□□ 0.37
Smc3Q9CW03 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc3Q9CW03 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Rps4l-201ENSMUST00000071745 943 ntBASIC17.38■□□□□ 0.37
Smc3Q9CW03 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smc3Q9CW03 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm24589-201ENSMUST00000116692 94 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm11764-201ENSMUST00000120221 623 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm7230-201ENSMUST00000173026 815 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm45167-201ENSMUST00000208007 322 ntBASIC17.37■□□□□ 0.37
Smc3Q9CW03 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms