Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Gm44771-201ENSMUST00000206975 626 ntBASIC14.48□□□□□ -0.09
Trim16Q99PP9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.48□□□□□ -0.09
Trim16Q99PP9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.48□□□□□ -0.09
Trim16Q99PP9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim16Q99PP9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.48□□□□□ -0.09
Trim16Q99PP9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.47□□□□□ -0.09
Trim16Q99PP9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim16Q99PP9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.46□□□□□ -0.09
Trim16Q99PP9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim16Q99PP9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms