Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Rubie-203ENSMUST00000227803 2430 ntBASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm6296-201ENSMUST00000222599 943 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim8Q99PJ2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim8Q99PJ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim8Q99PJ2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms