Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Msh4Q99MT2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Mir3113-201ENSMUST00000175478 76 ntBASIC14.42□□□□□ -0.1
Msh4Q99MT2 Mir8117-201ENSMUST00000184773 107 ntBASIC14.42□□□□□ -0.1
Msh4Q99MT2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh4Q99MT2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Gm13597-201ENSMUST00000121239 375 ntBASIC14.41□□□□□ -0.1
Msh4Q99MT2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh4Q99MT2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.41□□□□□ -0.1
Msh4Q99MT2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Gm4995-201ENSMUST00000117247 432 ntBASIC14.4□□□□□ -0.1
Msh4Q99MT2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Gm10499-201ENSMUST00000174094 934 ntBASIC14.4□□□□□ -0.1
Msh4Q99MT2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.4□□□□□ -0.1
Msh4Q99MT2 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.4□□□□□ -0.1
Msh4Q99MT2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Msh4Q99MT2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Msh4Q99MT2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.39□□□□□ -0.11
Msh4Q99MT2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.39□□□□□ -0.11
Msh4Q99MT2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh4Q99MT2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Msh4Q99MT2 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.39□□□□□ -0.11
Msh4Q99MT2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms