Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Gm15590-201ENSMUST00000078419 552 ntBASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14□□□□□ -0.17
Chmp1b1Q99LU0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1b1Q99LU0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Gm11764-201ENSMUST00000120221 623 ntBASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Gm18206-201ENSMUST00000207027 926 ntBASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1b1Q99LU0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1b1Q99LU0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms