Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Gm24543-201ENSMUST00000103867 82 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm8602-201ENSMUST00000184045 607 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm18062-201ENSMUST00000208020 547 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Gm18055-201ENSMUST00000208254 547 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cstf1Q99LC2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Asic1-205ENSMUST00000228185 1818 ntBASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf1Q99LC2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Gm18018-201ENSMUST00000198273 408 ntBASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Gm9908-201ENSMUST00000211534 448 ntBASIC14.75□□□□□ -0.05
Cstf1Q99LC2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf1Q99LC2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Mir7085-201ENSMUST00000184353 66 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms