Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vmp1Q99KU0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Gm14140-201ENSMUST00000119999 995 ntBASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmp1Q99KU0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmp1Q99KU0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms