Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk9Q99J95 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.93□□□□□ -0.02
Cdk9Q99J95 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdk9Q99J95 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Gm27742-201ENSMUST00000184667 60 ntBASIC14.92□□□□□ -0.02
Cdk9Q99J95 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.92□□□□□ -0.02
Cdk9Q99J95 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cdk9Q99J95 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm9103-201ENSMUST00000119371 405 ntBASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.91□□□□□ -0.02
Cdk9Q99J95 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.91□□□□□ -0.02
Cdk9Q99J95 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk9Q99J95 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Gm17807-201ENSMUST00000186869 298 ntBASIC14.9□□□□□ -0.02
Cdk9Q99J95 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.9□□□□□ -0.02
Cdk9Q99J95 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk9Q99J95 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.89□□□□□ -0.03
Cdk9Q99J95 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms