Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm23547-201ENSMUST00000158210 271 ntBASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm9726-201ENSMUST00000180321 678 ntBASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm27301-201ENSMUST00000184012 127 ntBASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb1Q91Y08 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Gm17968-201ENSMUST00000194902 784 ntBASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 AW822252-206ENSMUST00000208904 237 ntBASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb1Q91Y08 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Gm45747-201ENSMUST00000212203 999 ntBASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb1Q91Y08 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms