Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb15Q91Y04 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Gm4899-201ENSMUST00000178708 719 ntBASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb15Q91Y04 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Gm18246-201ENSMUST00000221023 728 ntBASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb15Q91Y04 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb15Q91Y04 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb15Q91Y04 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms