Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga3Q91XY5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Gm13036-201ENSMUST00000117799 748 ntBASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Mir5131-201ENSMUST00000175426 93 ntBASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga3Q91XY5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Gm45167-201ENSMUST00000208007 322 ntBASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Mzt1-203ENSMUST00000227948 952 ntBASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga3Q91XY5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Celf4-206ENSMUST00000224553 1729 ntBASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Mir5126-201ENSMUST00000175513 77 ntBASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms