Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lims2Q91XD2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lims2Q91XD2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lims2Q91XD2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lims2Q91XD2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Lims2Q91XD2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.07■□□□□ 0
Lims2Q91XD2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lims2Q91XD2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lims2Q91XD2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Gm14042-201ENSMUST00000120139 833 ntBASIC15.06■□□□□ 0
Lims2Q91XD2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.06■□□□□ 0
Lims2Q91XD2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Lims2Q91XD2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.06■□□□□ 0
Lims2Q91XD2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.06■□□□□ 0
Lims2Q91XD2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lims2Q91XD2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lims2Q91XD2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.06■□□□□ 0
Lims2Q91XD2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lims2Q91XD2 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.06■□□□□ 0
Lims2Q91XD2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Lims2Q91XD2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lims2Q91XD2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lims2Q91XD2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Lims2Q91XD2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lims2Q91XD2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lims2Q91XD2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.05■□□□□ -0
Lims2Q91XD2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.05■□□□□ -0
Lims2Q91XD2 Gm25144-201ENSMUST00000179561 110 ntBASIC15.05■□□□□ -0
Lims2Q91XD2 Gm25352-201ENSMUST00000179815 110 ntBASIC15.05■□□□□ -0
Lims2Q91XD2 Gm27618-201ENSMUST00000183671 60 ntBASIC15.05■□□□□ -0
Lims2Q91XD2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Lims2Q91XD2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.05■□□□□ -0
Lims2Q91XD2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.05■□□□□ -0
Lims2Q91XD2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.05■□□□□ -0
Lims2Q91XD2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lims2Q91XD2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lims2Q91XD2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.04■□□□□ -0
Lims2Q91XD2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.04■□□□□ -0
Lims2Q91XD2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.04■□□□□ -0
Lims2Q91XD2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Gm9719-201ENSMUST00000162765 543 ntBASIC15.04■□□□□ -0
Lims2Q91XD2 Gm27622-201ENSMUST00000183779 60 ntBASIC15.04■□□□□ -0
Lims2Q91XD2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lims2Q91XD2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lims2Q91XD2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lims2Q91XD2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.03■□□□□ -0
Lims2Q91XD2 Gm12428-201ENSMUST00000119844 727 ntBASIC15.03■□□□□ -0
Lims2Q91XD2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lims2Q91XD2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms