Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb21Q91V48 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm13597-201ENSMUST00000121239 375 ntBASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb21Q91V48 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb21Q91V48 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb21Q91V48 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms