Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H1fooQ8VIK3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H1fooQ8VIK3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H1fooQ8VIK3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H1fooQ8VIK3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.37□□□□□ -0.43
H1fooQ8VIK3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms