Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Gm7977-201ENSMUST00000193787 748 ntBASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Gm18622-201ENSMUST00000219361 595 ntBASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpa1Q8VEE4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm6345-202ENSMUST00000180900 204 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.92□□□□□ -0.02
Rpa1Q8VEE4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Gm8318-201ENSMUST00000182954 872 ntBASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms