Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Vps39Q8R5L3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Gm4899-201ENSMUST00000178708 719 ntBASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Gm5864-201ENSMUST00000202263 970 ntBASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps39Q8R5L3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps39Q8R5L3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms