Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atp2a1Q8R429 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atp2a1Q8R429 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atp2a1Q8R429 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atp2a1Q8R429 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm13015-201ENSMUST00000118674 204 ntBASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm27618-201ENSMUST00000183671 60 ntBASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.51■□□□□ 0.23
Atp2a1Q8R429 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Gm18049-201ENSMUST00000208909 581 ntBASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp2a1Q8R429 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Gm27306-201ENSMUST00000183970 107 ntBASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Gm27321-201ENSMUST00000185021 205 ntBASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
Atp2a1Q8R429 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Gm13223-201ENSMUST00000118609 747 ntBASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Atp2a1Q8R429 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms