Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc59Q8R2N0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Gm44771-201ENSMUST00000206975 626 ntBASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc59Q8R2N0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc59Q8R2N0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc59Q8R2N0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms