Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp7Q8R1T1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Gm4875-201ENSMUST00000118257 786 ntBASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Gm29667-201ENSMUST00000190817 490 ntBASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp7Q8R1T1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp7Q8R1T1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Gm43703-201ENSMUST00000200523 763 ntBASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Gm45453-201ENSMUST00000211758 853 ntBASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp7Q8R1T1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Gm3436-201ENSMUST00000179930 840 ntBASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Olfr286-202ENSMUST00000205305 969 ntBASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.82■□□□□ 0.6
Chmp7Q8R1T1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms