Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm22065-201ENSMUST00000103753 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22066-201ENSMUST00000103761 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24932-201ENSMUST00000103763 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24115-201ENSMUST00000103799 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22190-201ENSMUST00000103827 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22191-201ENSMUST00000103831 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25287-201ENSMUST00000103846 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24721-201ENSMUST00000103849 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22918-201ENSMUST00000103855 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm28018-201ENSMUST00000103869 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm26399-201ENSMUST00000103937 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25349-201ENSMUST00000177728 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm23616-201ENSMUST00000177797 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25871-201ENSMUST00000177816 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24752-201ENSMUST00000178240 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24496-201ENSMUST00000178287 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25649-201ENSMUST00000178476 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25548-201ENSMUST00000178681 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm23147-201ENSMUST00000178841 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm26095-201ENSMUST00000179270 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22171-201ENSMUST00000179283 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm23936-201ENSMUST00000179354 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm22619-201ENSMUST00000179516 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25255-201ENSMUST00000179579 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24755-201ENSMUST00000179691 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm26506-201ENSMUST00000179692 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm25086-201ENSMUST00000179931 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm23243-201ENSMUST00000180047 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24659-201ENSMUST00000180212 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm24169-201ENSMUST00000180244 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm9726-201ENSMUST00000180321 678 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm23689-201ENSMUST00000180354 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm27359-201ENSMUST00000184153 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm27785-201ENSMUST00000184268 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm27466-201ENSMUST00000184396 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm27703-201ENSMUST00000184836 110 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Gm38225-201ENSMUST00000194001 393 ntBASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp40Q8R1F9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Olfr286-202ENSMUST00000205305 969 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Gm45098-201ENSMUST00000207179 657 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms