Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Zscan30-202ENSMUST00000224144 1458 ntBASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx54Q8K4L0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx54Q8K4L0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Gm7172-201ENSMUST00000218047 1152 ntBASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx54Q8K4L0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ddx54Q8K4L0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms