Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm28659-201ENSMUST00000188013 759 ntBASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm5864-201ENSMUST00000202263 970 ntBASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Gm10819-201ENSMUST00000099988 561 ntBASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.49■□□□□ 0.39
Cchcr1Q8K2I2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cchcr1Q8K2I2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.47■□□□□ 0.39
Cchcr1Q8K2I2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.46■□□□□ 0.39
Cchcr1Q8K2I2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms