Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.94□□□□□ -0.02
Clip4Q8CI96 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Clip4Q8CI96 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm11779-201ENSMUST00000118541 368 ntBASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm4899-201ENSMUST00000178708 719 ntBASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm8000-201ENSMUST00000188378 592 ntBASIC14.93□□□□□ -0.02
Clip4Q8CI96 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.93□□□□□ -0.02
Clip4Q8CI96 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.93□□□□□ -0.02
Clip4Q8CI96 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Clip4Q8CI96 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 Gm14722-201ENSMUST00000118943 689 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 Gm12260-201ENSMUST00000122447 411 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Gm9727-201ENSMUST00000161387 555 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.92□□□□□ -0.02
Clip4Q8CI96 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clip4Q8CI96 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.91□□□□□ -0.02
Clip4Q8CI96 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Gm15467-201ENSMUST00000120582 445 ntBASIC14.91□□□□□ -0.02
Clip4Q8CI96 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clip4Q8CI96 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms