Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm29109-201ENSMUST00000185895 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21896-201ENSMUST00000186520 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21873-201ENSMUST00000186728 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21794-201ENSMUST00000187056 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21880-201ENSMUST00000187275 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21826-201ENSMUST00000187451 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21198-201ENSMUST00000188393 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21749-201ENSMUST00000189343 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21901-201ENSMUST00000189568 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm29424-201ENSMUST00000189716 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm28599-201ENSMUST00000189838 694 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21867-201ENSMUST00000189917 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm29269-201ENSMUST00000190087 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21722-201ENSMUST00000190153 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm28423-201ENSMUST00000190701 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21899-201ENSMUST00000190745 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21910-201ENSMUST00000191163 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21849-201ENSMUST00000191571 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm28678-201ENSMUST00000191593 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm20910-201ENSMUST00000193268 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21871-201ENSMUST00000194621 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab11fip3Q8CHD8 Gm24543-201ENSMUST00000103867 82 ntBASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Mir7684-201ENSMUST00000183858 60 ntBASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rab11fip3Q8CHD8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab11fip3Q8CHD8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Gm27989-201ENSMUST00000184721 107 ntBASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Gm37230-201ENSMUST00000194491 818 ntBASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab11fip3Q8CHD8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms