Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm27622-201ENSMUST00000183779 60 ntBASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm45098-201ENSMUST00000207179 657 ntBASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rdh1Q8CGV4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh1Q8CGV4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Rdh1Q8CGV4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rdh1Q8CGV4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rdh1Q8CGV4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rdh1Q8CGV4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rdh1Q8CGV4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm8749-201ENSMUST00000117737 331 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms