Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Gm27572-201ENSMUST00000183702 255 ntBASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Gm27486-201ENSMUST00000184923 80 ntBASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Gm43118-201ENSMUST00000199149 775 ntBASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Gm7561-201ENSMUST00000211203 886 ntBASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rp1l1Q8CGM2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm21470-201ENSMUST00000187680 696 ntBASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm6983-201ENSMUST00000214912 628 ntBASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rp1l1Q8CGM2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Gm29127-201ENSMUST00000188304 517 ntBASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.08■□□□□ 0.01
Rp1l1Q8CGM2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rp1l1Q8CGM2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Gm22018-201ENSMUST00000104357 131 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Gm9823-201ENSMUST00000051212 327 ntBASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rp1l1Q8CGM2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms