Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Mir6420-201ENSMUST00000185032 102 ntBASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a6Q8C6K9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a6Q8C6K9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Mir1938-201ENSMUST00000158746 100 ntBASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm9522-201ENSMUST00000182394 926 ntBASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a6Q8C6K9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms